---
_id: '12816'
abstract:
- lang: eng
  text: Medical images need annotations with high-level semantic descriptors, so that
    domain experts can search for the desired dataset among an enormous volume of
    visual media within a Medical Data Integration Center. This article introduces
    a processing pipeline for storing and annotating DICOM and PNG imaging data by
    applying Elasticsearch, S3 and Deep Learning technologies. The proposed method
    processes both DICOM and PNG images to generate annotations. These image annotations
    are indexed in Elasticsearch with the corresponding raw data paths, where they
    can be retrieved and analyzed.
author:
- first_name: Ka Yung
  full_name: Cheng, Ka Yung
  last_name: Cheng
- first_name: Santiago
  full_name: Pazmino, Santiago
  last_name: Pazmino
- first_name: Bjoern
  full_name: Bergh, Bjoern
  last_name: Bergh
- first_name: Markus
  full_name: Lange-Hegermann, Markus
  id: '71761'
  last_name: Lange-Hegermann
- first_name: Bjorn
  full_name: Schreiweis, Bjorn
  last_name: Schreiweis
citation:
  ama: Cheng KY, Pazmino S, Bergh B, Lange-Hegermann M, Schreiweis B. <i>An Image
    Retrieval Pipeline in a Medical Data Integration Center.</i> Vol 310. IOS Press,
    Incorporated; 2024:1388-1389. doi:<a href="https://doi.org/10.3233/SHTI231208">10.3233/SHTI231208</a>
  apa: Cheng, K. Y., Pazmino, S., Bergh, B., Lange-Hegermann, M., &#38; Schreiweis,
    B. (2024). An Image Retrieval Pipeline in a Medical Data Integration Center. In
    <i>19th World Congress on Medical and Health Informatics (MEDINFO)</i> (Vol. 310,
    pp. 1388–1389). IOS Press, Incorporated. <a href="https://doi.org/10.3233/SHTI231208">https://doi.org/10.3233/SHTI231208</a>
  bjps: <b>Cheng KY <i>et al.</i></b> (2024) <i>An Image Retrieval Pipeline in a Medical
    Data Integration Center.</i> IOS Press, Incorporated.
  chicago: Cheng, Ka Yung, Santiago Pazmino, Bjoern Bergh, Markus Lange-Hegermann,
    and Bjorn Schreiweis. <i>An Image Retrieval Pipeline in a Medical Data Integration
    Center.</i> <i>19th World Congress on Medical and Health Informatics (MEDINFO)</i>.
    Vol. 310. Studies in Health Technology and Informatics. IOS Press, Incorporated,
    2024. <a href="https://doi.org/10.3233/SHTI231208">https://doi.org/10.3233/SHTI231208</a>.
  chicago-de: Cheng, Ka Yung, Santiago Pazmino, Bjoern Bergh, Markus Lange-Hegermann
    und Bjorn Schreiweis. 2024. <i>An Image Retrieval Pipeline in a Medical Data Integration
    Center.</i> <i>19th World Congress on Medical and Health Informatics (MEDINFO)</i>.
    Bd. 310. Studies in Health Technology and Informatics. IOS Press, Incorporated.
    doi:<a href="https://doi.org/10.3233/SHTI231208">10.3233/SHTI231208</a>, .
  din1505-2-1: '<span style="font-variant:small-caps;">Cheng, Ka Yung</span> ; <span
    style="font-variant:small-caps;">Pazmino, Santiago</span> ; <span style="font-variant:small-caps;">Bergh,
    Bjoern</span> ; <span style="font-variant:small-caps;">Lange-Hegermann, Markus</span>
    ; <span style="font-variant:small-caps;">Schreiweis, Bjorn</span>: <i>An Image
    Retrieval Pipeline in a Medical Data Integration Center.</i>, <i>Studies in Health
    Technology and Informatics</i>. Bd. 310 : IOS Press, Incorporated, 2024'
  havard: K.Y. Cheng, S. Pazmino, B. Bergh, M. Lange-Hegermann, B. Schreiweis, An
    Image Retrieval Pipeline in a Medical Data Integration Center., IOS Press, Incorporated,
    2024.
  ieee: 'K. Y. Cheng, S. Pazmino, B. Bergh, M. Lange-Hegermann, and B. Schreiweis,
    <i>An Image Retrieval Pipeline in a Medical Data Integration Center.</i>, vol.
    310. IOS Press, Incorporated, 2024, pp. 1388–1389. doi: <a href="https://doi.org/10.3233/SHTI231208">10.3233/SHTI231208</a>.'
  mla: Cheng, Ka Yung, et al. “An Image Retrieval Pipeline in a Medical Data Integration
    Center.” <i>19th World Congress on Medical and Health Informatics (MEDINFO)</i>,
    vol. 310, IOS Press, Incorporated, 2024, pp. 1388–89, <a href="https://doi.org/10.3233/SHTI231208">https://doi.org/10.3233/SHTI231208</a>.
  short: K.Y. Cheng, S. Pazmino, B. Bergh, M. Lange-Hegermann, B. Schreiweis, An Image
    Retrieval Pipeline in a Medical Data Integration Center., IOS Press, Incorporated,
    2024.
  ufg: '<b>Cheng, Ka Yung u. a.</b>: An Image Retrieval Pipeline in a Medical Data
    Integration Center., Bd. 310, o. O. 2024 (Studies in Health Technology and Informatics).'
  van: Cheng KY, Pazmino S, Bergh B, Lange-Hegermann M, Schreiweis B. An Image Retrieval
    Pipeline in a Medical Data Integration Center. 19th World Congress on Medical
    and Health Informatics (MEDINFO). IOS Press, Incorporated; 2024. (Studies in Health
    Technology and Informatics; vol. 310).
conference:
  end_date: 2023-08-12
  location: Sydney, AUSTRALIA
  name: 19th World Congress on Medical and Health Informatics (MEDINFO)
  start_date: 2023-08-08
date_created: 2025-04-17T08:25:27Z
date_updated: 2025-06-25T13:05:17Z
department:
- _id: DEP5023
doi: 10.3233/SHTI231208
external_id:
  pmid:
  - '38269660'
intvolume: '       310'
keyword:
- Medical image retrieval
- data lake
- DICOM
- deep learning
- elasticsearch
language:
- iso: eng
page: 1388-1389
pmid: '1'
publication: 19th World Congress on Medical and Health Informatics (MEDINFO)
publication_identifier:
  eisbn:
  - 978-1-64368-457-4
  eissn:
  - 1879-8365
  isbn:
  - 978-1-64368-456-7
  issn:
  - 0926-9630
publication_status: published
publisher: IOS Press, Incorporated
series_title: Studies in Health Technology and Informatics
status: public
title: An Image Retrieval Pipeline in a Medical Data Integration Center.
type: conference_speech
user_id: '83781'
volume: 310
year: '2024'
...
---
_id: '11558'
abstract:
- lang: eng
  text: Patient Reported Outcomes (PROs) provide essential clinical data for the diagnosis
    and treatment of patients. Mobile technologies enable rapid and structured collection
    of PROs with a high usability. MoPat is an electronic PRO system developed at
    the Münster University that enables patients to complete PROs in multiple languages.
    This research reports the further development of MoPat and the inclusion of features
    to document images electronically that will be evaluated in a multi-site clinical
    research.
author:
- first_name: 'Iñaki '
  full_name: 'Soto-Rey, Iñaki '
  last_name: Soto-Rey
- first_name: Tobias
  full_name: Hardt, Tobias
  last_name: Hardt
- first_name: Luca
  full_name: Hollenberg, Luca
  last_name: Hollenberg
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: Sonja
  full_name: Ständer, Sonja
  last_name: Ständer
- first_name: Martin
  full_name: Dugas, Martin
  last_name: Dugas
- first_name: Michael
  full_name: Storck, Michael
  last_name: Storck
citation:
  ama: Soto-Rey I, Hardt T, Hollenberg L, et al. Electronic Image Documentation of
    Patient Reported Outcomes Using Mobile Technologies. <i>Stud Health Technol Inform</i>.
    2019;264:1779-1780. doi:<a href="https://doi.org/10.3233/SHTI190644">10.3233/SHTI190644</a>
  apa: Soto-Rey, I., Hardt, T., Hollenberg, L., Bruland, P., Ständer, S., Dugas, M.,
    &#38; Storck, M. (2019). Electronic Image Documentation of Patient Reported Outcomes
    Using Mobile Technologies. <i>Stud Health Technol Inform</i>, <i>264</i>, 1779–1780.
    <a href="https://doi.org/10.3233/SHTI190644">https://doi.org/10.3233/SHTI190644</a>
  bjps: <b>Soto-Rey I <i>et al.</i></b> (2019) Electronic Image Documentation of Patient
    Reported Outcomes Using Mobile Technologies. <i>Stud Health Technol Inform</i>
    <b>264</b>, 1779–1780.
  chicago: 'Soto-Rey, Iñaki , Tobias Hardt, Luca Hollenberg, Philipp Bruland, Sonja
    Ständer, Martin Dugas, and Michael Storck. “Electronic Image Documentation of
    Patient Reported Outcomes Using Mobile Technologies.” <i>Stud Health Technol Inform</i>
    264 (2019): 1779–80. <a href="https://doi.org/10.3233/SHTI190644">https://doi.org/10.3233/SHTI190644</a>.'
  chicago-de: 'Soto-Rey, Iñaki , Tobias Hardt, Luca Hollenberg, Philipp Bruland, Sonja
    Ständer, Martin Dugas und Michael Storck. 2019. Electronic Image Documentation
    of Patient Reported Outcomes Using Mobile Technologies. <i>Stud Health Technol
    Inform</i> 264: 1779–1780. doi:<a href="https://doi.org/10.3233/SHTI190644">10.3233/SHTI190644</a>,
    .'
  din1505-2-1: '<span style="font-variant:small-caps;">Soto-Rey, Iñaki </span> ; <span
    style="font-variant:small-caps;">Hardt, Tobias</span> ; <span style="font-variant:small-caps;">Hollenberg,
    Luca</span> ; <span style="font-variant:small-caps;">Bruland, Philipp</span> ;
    <span style="font-variant:small-caps;">Ständer, Sonja</span> ; <span style="font-variant:small-caps;">Dugas,
    Martin</span> ; <span style="font-variant:small-caps;">Storck, Michael</span>:
    Electronic Image Documentation of Patient Reported Outcomes Using Mobile Technologies.
    In: <i>Stud Health Technol Inform</i> Bd. 264, IOS Press (2019), S. 1779–1780'
  havard: I. Soto-Rey, T. Hardt, L. Hollenberg, P. Bruland, S. Ständer, M. Dugas,
    M. Storck, Electronic Image Documentation of Patient Reported Outcomes Using Mobile
    Technologies., Stud Health Technol Inform. 264 (2019) 1779–1780.
  ieee: 'I. Soto-Rey <i>et al.</i>, “Electronic Image Documentation of Patient Reported
    Outcomes Using Mobile Technologies.,” <i>Stud Health Technol Inform</i>, vol.
    264, pp. 1779–1780, 2019, doi: <a href="https://doi.org/10.3233/SHTI190644">10.3233/SHTI190644</a>.'
  mla: Soto-Rey, Iñaki, et al. “Electronic Image Documentation of Patient Reported
    Outcomes Using Mobile Technologies.” <i>Stud Health Technol Inform</i>, vol. 264,
    2019, pp. 1779–80, <a href="https://doi.org/10.3233/SHTI190644">https://doi.org/10.3233/SHTI190644</a>.
  short: I. Soto-Rey, T. Hardt, L. Hollenberg, P. Bruland, S. Ständer, M. Dugas, M.
    Storck, Stud Health Technol Inform 264 (2019) 1779–1780.
  ufg: '<b>Soto-Rey, Iñaki u. a.</b>: Electronic Image Documentation of Patient Reported
    Outcomes Using Mobile Technologies., in: <i>Stud Health Technol Inform</i> 264
    (2019),  S. 1779–1780.'
  van: Soto-Rey I, Hardt T, Hollenberg L, Bruland P, Ständer S, Dugas M, et al. Electronic
    Image Documentation of Patient Reported Outcomes Using Mobile Technologies. Stud
    Health Technol Inform. 2019;264:1779–80.
date_created: 2024-06-24T07:30:00Z
date_updated: 2024-07-18T13:02:49Z
department:
- _id: DEP5024
doi: 10.3233/SHTI190644
extern: '1'
external_id:
  pmid:
  - '31438340'
intvolume: '       264'
keyword:
- Electronic documentation
- Mobile Health
- Patient-reported Outcomes.
language:
- iso: eng
page: 1779-1780
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publisher: IOS Press
status: public
title: Electronic Image Documentation of Patient Reported Outcomes Using Mobile Technologies.
type: journal_article
user_id: '83781'
volume: 264
year: '2019'
...
---
_id: '11569'
author:
- first_name: AK
  full_name: Kock-Schoppenhauer, AK
  last_name: Kock-Schoppenhauer
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: D
  full_name: Kadioglu, D
  last_name: Kadioglu
- first_name: D
  full_name: Brammen, D
  last_name: Brammen
- first_name: H
  full_name: Ulrich, H
  last_name: Ulrich
- first_name: K
  full_name: Kulbe, K
  last_name: Kulbe
- first_name: P
  full_name: Duhm-Harbeck, P
  last_name: Duhm-Harbeck
- first_name: J
  full_name: Ingenerf, J
  last_name: Ingenerf
citation:
  ama: 'Kock-Schoppenhauer A, Bruland P, Kadioglu D, et al. Scientific Challenge in
    eHealth: MAPPATHON, a Metadata Mapping Challenge. <i>Stud Health Technol Inform</i>.
    2019;264:1516-1517. doi:<a href="https://doi.org/10.3233/SHTI190512">10.3233/SHTI190512</a>'
  apa: 'Kock-Schoppenhauer, A., Bruland, P., Kadioglu, D., Brammen, D., Ulrich, H.,
    Kulbe, K., Duhm-Harbeck, P., &#38; Ingenerf, J. (2019). Scientific Challenge in
    eHealth: MAPPATHON, a Metadata Mapping Challenge. <i>Stud Health Technol Inform</i>,
    <i>264</i>, 1516–1517. <a href="https://doi.org/10.3233/SHTI190512">https://doi.org/10.3233/SHTI190512</a>'
  bjps: '<b>Kock-Schoppenhauer A <i>et al.</i></b> (2019) Scientific Challenge in
    EHealth: MAPPATHON, a Metadata Mapping Challenge. <i>Stud Health Technol Inform</i>
    <b>264</b>, 1516–1517.'
  chicago: 'Kock-Schoppenhauer, AK, Philipp Bruland, D Kadioglu, D Brammen, H Ulrich,
    K Kulbe, P Duhm-Harbeck, and J Ingenerf. “Scientific Challenge in EHealth: MAPPATHON,
    a Metadata Mapping Challenge.” <i>Stud Health Technol Inform</i> 264 (2019): 1516–17.
    <a href="https://doi.org/10.3233/SHTI190512">https://doi.org/10.3233/SHTI190512</a>.'
  chicago-de: 'Kock-Schoppenhauer, AK, Philipp Bruland, D Kadioglu, D Brammen, H Ulrich,
    K Kulbe, P Duhm-Harbeck und J Ingenerf. 2019. Scientific Challenge in eHealth:
    MAPPATHON, a Metadata Mapping Challenge. <i>Stud Health Technol Inform</i> 264:
    1516–1517. doi:<a href="https://doi.org/10.3233/SHTI190512">10.3233/SHTI190512</a>,
    .'
  din1505-2-1: '<span style="font-variant:small-caps;">Kock-Schoppenhauer, AK</span>
    ; <span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span style="font-variant:small-caps;">Kadioglu,
    D</span> ; <span style="font-variant:small-caps;">Brammen, D</span> ; <span style="font-variant:small-caps;">Ulrich,
    H</span> ; <span style="font-variant:small-caps;">Kulbe, K</span> ; <span style="font-variant:small-caps;">Duhm-Harbeck,
    P</span> ; <span style="font-variant:small-caps;">Ingenerf, J</span>: Scientific
    Challenge in eHealth: MAPPATHON, a Metadata Mapping Challenge. In: <i>Stud Health
    Technol Inform</i> Bd. 264 (2019), S. 1516–1517'
  havard: 'A. Kock-Schoppenhauer, P. Bruland, D. Kadioglu, D. Brammen, H. Ulrich,
    K. Kulbe, P. Duhm-Harbeck, J. Ingenerf, Scientific Challenge in eHealth: MAPPATHON,
    a Metadata Mapping Challenge., Stud Health Technol Inform. 264 (2019) 1516–1517.'
  ieee: 'A. Kock-Schoppenhauer <i>et al.</i>, “Scientific Challenge in eHealth: MAPPATHON,
    a Metadata Mapping Challenge.,” <i>Stud Health Technol Inform</i>, vol. 264, pp.
    1516–1517, 2019, doi: <a href="https://doi.org/10.3233/SHTI190512">10.3233/SHTI190512</a>.'
  mla: 'Kock-Schoppenhauer, AK, et al. “Scientific Challenge in EHealth: MAPPATHON,
    a Metadata Mapping Challenge.” <i>Stud Health Technol Inform</i>, vol. 264, 2019,
    pp. 1516–17, <a href="https://doi.org/10.3233/SHTI190512">https://doi.org/10.3233/SHTI190512</a>.'
  short: A. Kock-Schoppenhauer, P. Bruland, D. Kadioglu, D. Brammen, H. Ulrich, K.
    Kulbe, P. Duhm-Harbeck, J. Ingenerf, Stud Health Technol Inform 264 (2019) 1516–1517.
  ufg: '<b>Kock-Schoppenhauer, AK u. a.</b>: Scientific Challenge in eHealth: MAPPATHON,
    a Metadata Mapping Challenge., in: <i>Stud Health Technol Inform</i> 264 (2019), 
    S. 1516–1517.'
  van: 'Kock-Schoppenhauer A, Bruland P, Kadioglu D, Brammen D, Ulrich H, Kulbe K,
    et al. Scientific Challenge in eHealth: MAPPATHON, a Metadata Mapping Challenge.
    Stud Health Technol Inform. 2019;264:1516–7.'
date_created: 2024-06-24T07:34:14Z
date_updated: 2024-07-18T12:53:10Z
department:
- _id: DEP5024
doi: 10.3233/SHTI190512
extern: '1'
external_id:
  pmid:
  - '31438209'
intvolume: '       264'
language:
- iso: eng
page: 1516-1517
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  issn:
  - 0926-9630
  - 1879-8365
status: public
title: 'Scientific Challenge in eHealth: MAPPATHON, a Metadata Mapping Challenge.'
type: journal_article
user_id: '83781'
volume: 264
year: '2019'
...
---
_id: '11561'
abstract:
- lang: eng
  text: CDISC's Operational Data Model (ODM) is a flexible standard for exchanging
    and archiving metadata and subject clinical data in clinical trials. The Portal
    of Medical Data Models (MDM-Portal) uses ODM to store more than 15000 medical
    forms. As not every electronic health system accepts ODM as input format, there
    is a need for conversion between ODM and other data standards and formats. This
    research proposes a standardised template-based process to develop ODM converters.
    So far, ten converters have been developed and integrated in the MDM-Portal following
    this process and new ones should be included soon. The template, programming utilities
    and an ODM test suite have been made online available and can be used to easily
    develop new converters.
author:
- first_name: I
  full_name: Soto-Rey, I
  last_name: Soto-Rey
- first_name: P
  full_name: Neuhaus, P
  last_name: Neuhaus
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: S
  full_name: Geßner, S
  last_name: Geßner
- first_name: J
  full_name: Varghese, J
  last_name: Varghese
- first_name: S
  full_name: Hegselmann, S
  last_name: Hegselmann
- first_name: T
  full_name: Brix, T
  last_name: Brix
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
- first_name: M
  full_name: Storck, M
  last_name: Storck
citation:
  ama: 'Soto-Rey I, Neuhaus P, Bruland P, et al. Standardising the Development of
    ODM Converters: The ODMToolBox. <i>Stud Health Technol Inform</i>. 2018;247:231-235.'
  apa: 'Soto-Rey, I., Neuhaus, P., Bruland, P., Geßner, S., Varghese, J., Hegselmann,
    S., Brix, T., Dugas, M., &#38; Storck, M. (2018). Standardising the Development
    of ODM Converters: The ODMToolBox. <i>Stud Health Technol Inform</i>, <i>247</i>,
    231–235.'
  bjps: '<b>Soto-Rey I <i>et al.</i></b> (2018) Standardising the Development of ODM
    Converters: The ODMToolBox. <i>Stud Health Technol Inform</i> <b>247</b>, 231–235.'
  chicago: 'Soto-Rey, I, P Neuhaus, Philipp Bruland, S Geßner, J Varghese, S Hegselmann,
    T Brix, M Dugas, and M Storck. “Standardising the Development of ODM Converters:
    The ODMToolBox.” <i>Stud Health Technol Inform</i> 247 (2018): 231–35.'
  chicago-de: 'Soto-Rey, I, P Neuhaus, Philipp Bruland, S Geßner, J Varghese, S Hegselmann,
    T Brix, M Dugas und M Storck. 2018. Standardising the Development of ODM Converters:
    The ODMToolBox. <i>Stud Health Technol Inform</i> 247: 231–235.'
  din1505-2-1: '<span style="font-variant:small-caps;"><span style="font-variant:small-caps;">Soto-Rey,
    I</span> ; <span style="font-variant:small-caps;">Neuhaus, P</span> ; <span style="font-variant:small-caps;">Bruland,
    Philipp</span> ; <span style="font-variant:small-caps;">Geßner, S</span> ; <span
    style="font-variant:small-caps;">Varghese, J</span> ; <span style="font-variant:small-caps;">Hegselmann,
    S</span> ; <span style="font-variant:small-caps;">Brix, T</span> ; <span style="font-variant:small-caps;">Dugas,
    M</span> ; u. a.</span>: Standardising the Development of ODM Converters: The
    ODMToolBox. In: <i>Stud Health Technol Inform</i> Bd. 247 (2018), S. 231–235'
  havard: 'I. Soto-Rey, P. Neuhaus, P. Bruland, S. Geßner, J. Varghese, S. Hegselmann,
    T. Brix, M. Dugas, M. Storck, Standardising the Development of ODM Converters:
    The ODMToolBox., Stud Health Technol Inform. 247 (2018) 231–235.'
  ieee: 'I. Soto-Rey <i>et al.</i>, “Standardising the Development of ODM Converters:
    The ODMToolBox.,” <i>Stud Health Technol Inform</i>, vol. 247, pp. 231–235, 2018.'
  mla: 'Soto-Rey, I., et al. “Standardising the Development of ODM Converters: The
    ODMToolBox.” <i>Stud Health Technol Inform</i>, vol. 247, 2018, pp. 231–35.'
  short: I. Soto-Rey, P. Neuhaus, P. Bruland, S. Geßner, J. Varghese, S. Hegselmann,
    T. Brix, M. Dugas, M. Storck, Stud Health Technol Inform 247 (2018) 231–235.
  ufg: '<b>Soto-Rey, I. u. a.</b>: Standardising the Development of ODM Converters:
    The ODMToolBox., in: <i>Stud Health Technol Inform</i> 247 (2018),  S. 231–235.'
  van: 'Soto-Rey I, Neuhaus P, Bruland P, Geßner S, Varghese J, Hegselmann S, et al.
    Standardising the Development of ODM Converters: The ODMToolBox. Stud Health Technol
    Inform. 2018;247:231–5.'
date_created: 2024-06-24T07:30:35Z
date_updated: 2024-07-18T12:57:21Z
department:
- _id: DEP5024
extern: '1'
external_id:
  pmid:
  - '29677957'
intvolume: '       247'
keyword:
- CDISC ODM
- Semantics
- interoperability
language:
- iso: eng
page: 231-235
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
status: public
title: 'Standardising the Development of ODM Converters: The ODMToolBox.'
type: journal_article
user_id: '83781'
volume: 247
year: '2018'
...
---
_id: '11577'
abstract:
- lang: eng
  text: The establishment of a digital healthcare system is a national and community
    task. The Federal Ministry of Education and Research in Germany is providing funding
    for consortia consisting of university hospitals among others participating in
    the "Medical Informatics Initiative". Exchange of medical data between research
    institutions necessitates a place where meta information for this data is made
    accessible. Within these consortia different metadata registry solutions were
    chosen. To promote interoperability between these solutions, we have examined
    whether the portal of Medical Data Models is eligible for managing and communicating
    metadata and relevant information across different data integration centres of
    the Medical Informatics Initiative and beyond. Apart from the MDM-portal, some
    ISO 11179-based systems such as Samply.MDR as well as openEHR-based solutions
    are going to be applyed. In this paper, we have focused on the creation of a mapping
    model between the CDISC ODM standard and the Samply.MDR import format. In summary,
    it can be stated that the mapping model is feasible and promote the exchangeability
    between different metadata registry approaches.
author:
- first_name: AK
  full_name: Kock-Schoppenhauer, AK
  last_name: Kock-Schoppenhauer
- first_name: H
  full_name: Ulrich, H
  last_name: Ulrich
- first_name: S
  full_name: Wagen-Zink, S
  last_name: Wagen-Zink
- first_name: P
  full_name: Duhm-Harbeck, P
  last_name: Duhm-Harbeck
- first_name: J
  full_name: Ingenerf, J
  last_name: Ingenerf
- first_name: P
  full_name: Neuhaus, P
  last_name: Neuhaus
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
citation:
  ama: 'Kock-Schoppenhauer A, Ulrich H, Wagen-Zink S, et al. Compatibility Between
    Metadata Standards: Import Pipeline of CDISC ODM to the Samply.MDR. <i>Studies
    in health technology and informatics</i>. 2018;247:221-225.'
  apa: 'Kock-Schoppenhauer, A., Ulrich, H., Wagen-Zink, S., Duhm-Harbeck, P., Ingenerf,
    J., Neuhaus, P., Dugas, M., &#38; Bruland, P. (2018). Compatibility Between Metadata
    Standards: Import Pipeline of CDISC ODM to the Samply.MDR. <i>Studies in Health
    Technology and Informatics</i>, <i>247</i>, 221–225.'
  bjps: '<b>Kock-Schoppenhauer A <i>et al.</i></b> (2018) Compatibility Between Metadata
    Standards: Import Pipeline of CDISC ODM to the Samply.MDR. <i>Studies in health
    technology and informatics</i> <b>247</b>, 221–225.'
  chicago: 'Kock-Schoppenhauer, AK, H Ulrich, S Wagen-Zink, P Duhm-Harbeck, J Ingenerf,
    P Neuhaus, M Dugas, and Philipp Bruland. “Compatibility Between Metadata Standards:
    Import Pipeline of CDISC ODM to the Samply.MDR.” <i>Studies in Health Technology
    and Informatics</i> 247 (2018): 221–25.'
  chicago-de: 'Kock-Schoppenhauer, AK, H Ulrich, S Wagen-Zink, P Duhm-Harbeck, J Ingenerf,
    P Neuhaus, M Dugas und Philipp Bruland. 2018. Compatibility Between Metadata Standards:
    Import Pipeline of CDISC ODM to the Samply.MDR. <i>Studies in health technology
    and informatics</i> 247: 221–225.'
  din1505-2-1: '<span style="font-variant:small-caps;">Kock-Schoppenhauer, AK</span>
    ; <span style="font-variant:small-caps;">Ulrich, H</span> ; <span style="font-variant:small-caps;">Wagen-Zink,
    S</span> ; <span style="font-variant:small-caps;">Duhm-Harbeck, P</span> ; <span
    style="font-variant:small-caps;">Ingenerf, J</span> ; <span style="font-variant:small-caps;">Neuhaus,
    P</span> ; <span style="font-variant:small-caps;">Dugas, M</span> ; <span style="font-variant:small-caps;">Bruland,
    Philipp</span>: Compatibility Between Metadata Standards: Import Pipeline of CDISC
    ODM to the Samply.MDR. In: <i>Studies in health technology and informatics</i>
    Bd. 247,  IOS Press (2018), S. 221–225'
  havard: 'A. Kock-Schoppenhauer, H. Ulrich, S. Wagen-Zink, P. Duhm-Harbeck, J. Ingenerf,
    P. Neuhaus, M. Dugas, P. Bruland, Compatibility Between Metadata Standards: Import
    Pipeline of CDISC ODM to the Samply.MDR., Studies in Health Technology and Informatics.
    247 (2018) 221–225.'
  ieee: 'A. Kock-Schoppenhauer <i>et al.</i>, “Compatibility Between Metadata Standards:
    Import Pipeline of CDISC ODM to the Samply.MDR.,” <i>Studies in health technology
    and informatics</i>, vol. 247, pp. 221–225, 2018.'
  mla: 'Kock-Schoppenhauer, AK, et al. “Compatibility Between Metadata Standards:
    Import Pipeline of CDISC ODM to the Samply.MDR.” <i>Studies in Health Technology
    and Informatics</i>, vol. 247, 2018, pp. 221–25.'
  short: A. Kock-Schoppenhauer, H. Ulrich, S. Wagen-Zink, P. Duhm-Harbeck, J. Ingenerf,
    P. Neuhaus, M. Dugas, P. Bruland, Studies in Health Technology and Informatics
    247 (2018) 221–225.
  ufg: '<b>Kock-Schoppenhauer, AK u. a.</b>: Compatibility Between Metadata Standards:
    Import Pipeline of CDISC ODM to the Samply.MDR., in: <i>Studies in health technology
    and informatics</i> 247 (2018),  S. 221–225.'
  van: 'Kock-Schoppenhauer A, Ulrich H, Wagen-Zink S, Duhm-Harbeck P, Ingenerf J,
    Neuhaus P, et al. Compatibility Between Metadata Standards: Import Pipeline of
    CDISC ODM to the Samply.MDR. Studies in health technology and informatics. 2018;247:221–5.'
date_created: 2024-06-24T07:36:34Z
date_updated: 2024-07-18T13:40:32Z
department:
- _id: DEP5024
external_id:
  pmid:
  - '29677955'
intvolume: '       247'
keyword:
- CDISC ODM
- MDR
- data elements
- mapping
- metadata registry
language:
- iso: eng
page: 221-225
pmid: '1'
publication: Studies in health technology and informatics
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publication_status: published
publisher: ' IOS Press'
status: public
title: 'Compatibility Between Metadata Standards: Import Pipeline of CDISC ODM to
  the Samply.MDR.'
type: journal_article
user_id: '83781'
volume: 247
year: '2018'
...
---
_id: '11560'
abstract:
- lang: eng
  text: 'To address current key problems of medical documentation: lack of transparency,
    overwhelming amount of medical contents to be documented and missing interoperability,
    the Portal of Medical Data Models (http://medical-data-models.org/) was established
    in 2012. Constantly evolving, four years later, the portal displays more than
    8900 medical data models with more than 250000 items, of which 84 % have been
    semantically annotated with UMLS codes to support interoperability. Giving an
    update on new functions and contents of the portal, two additional export formats
    have been implemented, allowing the reuse of forms such as HL7''s framework Fast
    Health Interoperability Resources (FHIR) Questionnaires, as well as the OpenDataKit
    format. Future projects include the implementation of an ODMtoOpenClinica converter,
    as well as supporting the reuse of forms with Apple''s ResearchKit and Android''s
    ResearchStack.'
author:
- first_name: S
  full_name: Geßner, S
  last_name: Geßner
- first_name: P
  full_name: Neuhaus, P
  last_name: Neuhaus
- first_name: J
  full_name: Varghese, J
  last_name: Varghese
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: A
  full_name: Meidt, A
  last_name: Meidt
- first_name: I
  full_name: Soto-Rey, I
  last_name: Soto-Rey
- first_name: M
  full_name: Storck, M
  last_name: Storck
- first_name: J
  full_name: Doods, J
  last_name: Doods
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
citation:
  ama: 'Geßner S, Neuhaus P, Varghese J, et al. The Portal of Medical Data Models:
    Where Have We Been and Where Are We Going? <i>Stud Health Technol Inform</i>.
    2017;245:858-862.'
  apa: 'Geßner, S., Neuhaus, P., Varghese, J., Bruland, P., Meidt, A., Soto-Rey, I.,
    Storck, M., Doods, J., &#38; Dugas, M. (2017). The Portal of Medical Data Models:
    Where Have We Been and Where Are We Going? <i>Stud Health Technol Inform</i>,
    <i>245</i>, 858–862.'
  bjps: '<b>Geßner S <i>et al.</i></b> (2017) The Portal of Medical Data Models: Where
    Have We Been and Where Are We Going? <i>Stud Health Technol Inform</i> <b>245</b>,
    858–862.'
  chicago: 'Geßner, S, P Neuhaus, J Varghese, Philipp Bruland, A Meidt, I Soto-Rey,
    M Storck, J Doods, and M Dugas. “The Portal of Medical Data Models: Where Have
    We Been and Where Are We Going?” <i>Stud Health Technol Inform</i> 245 (2017):
    858–62.'
  chicago-de: 'Geßner, S, P Neuhaus, J Varghese, Philipp Bruland, A Meidt, I Soto-Rey,
    M Storck, J Doods und M Dugas. 2017. The Portal of Medical Data Models: Where
    Have We Been and Where Are We Going? <i>Stud Health Technol Inform</i> 245: 858–862.'
  din1505-2-1: '<span style="font-variant:small-caps;"><span style="font-variant:small-caps;">Geßner,
    S</span> ; <span style="font-variant:small-caps;">Neuhaus, P</span> ; <span style="font-variant:small-caps;">Varghese,
    J</span> ; <span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span
    style="font-variant:small-caps;">Meidt, A</span> ; <span style="font-variant:small-caps;">Soto-Rey,
    I</span> ; <span style="font-variant:small-caps;">Storck, M</span> ; <span style="font-variant:small-caps;">Doods,
    J</span> ; u. a.</span>: The Portal of Medical Data Models: Where Have We Been
    and Where Are We Going? In: <i>Stud Health Technol Inform</i> Bd. 245,  IOS Press
    (2017), S. 858–862'
  havard: 'S. Geßner, P. Neuhaus, J. Varghese, P. Bruland, A. Meidt, I. Soto-Rey,
    M. Storck, J. Doods, M. Dugas, The Portal of Medical Data Models: Where Have We
    Been and Where Are We Going?, Stud Health Technol Inform. 245 (2017) 858–862.'
  ieee: 'S. Geßner <i>et al.</i>, “The Portal of Medical Data Models: Where Have We
    Been and Where Are We Going?,” <i>Stud Health Technol Inform</i>, vol. 245, pp.
    858–862, 2017.'
  mla: 'Geßner, S., et al. “The Portal of Medical Data Models: Where Have We Been
    and Where Are We Going?” <i>Stud Health Technol Inform</i>, vol. 245, 2017, pp.
    858–62.'
  short: S. Geßner, P. Neuhaus, J. Varghese, P. Bruland, A. Meidt, I. Soto-Rey, M.
    Storck, J. Doods, M. Dugas, Stud Health Technol Inform 245 (2017) 858–862.
  ufg: '<b>Geßner, S. u. a.</b>: The Portal of Medical Data Models: Where Have We
    Been and Where Are We Going?, in: <i>Stud Health Technol Inform</i> 245 (2017), 
    S. 858–862.'
  van: 'Geßner S, Neuhaus P, Varghese J, Bruland P, Meidt A, Soto-Rey I, et al. The
    Portal of Medical Data Models: Where Have We Been and Where Are We Going? Stud
    Health Technol Inform. 2017;245:858–62.'
date_created: 2024-06-24T07:30:25Z
date_updated: 2024-07-18T12:59:59Z
department:
- _id: DEP5024
extern: '1'
external_id:
  pmid:
  - '29295221'
intvolume: '       245'
keyword:
- Clinical Trial
- Semantics
- Surveys and Questionnaires
language:
- iso: eng
page: 858-862
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  issn:
  - 0926-9630
  - 1879-8365
publisher: ' IOS Press'
status: public
title: 'The Portal of Medical Data Models: Where Have We Been and Where Are We Going?'
type: journal_article
user_id: '83781'
volume: 245
year: '2017'
...
---
_id: '11576'
abstract:
- lang: eng
  text: Data dictionaries provide structural meta-information about data definitions
    in health information technology (HIT) systems. In this regard, reusing healthcare
    data for secondary purposes offers several advantages (e.g. reduce documentation
    times or increased data quality). Prerequisites for data reuse are its quality,
    availability and identical meaning of data. In diverse projects, research data
    warehouses serve as core components between heterogeneous clinical databases and
    various research applications. Given the complexity (high number of data elements)
    and dynamics (regular updates) of electronic health record (EHR) data structures,
    we propose a clinical metadata warehouse (CMDW) based on a metadata registry standard.
    Metadata of two large hospitals were automatically inserted into two CMDWs containing
    16,230 forms and 310,519 data elements. Automatic updates of metadata are possible
    as well as semantic annotations. A CMDW allows metadata discovery, data quality
    assessment and similarity analyses. Common data models for distributed research
    networks can be established based on similarity analyses.
author:
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: J
  full_name: Doods, J
  last_name: Doods
- first_name: M
  full_name: Storck, M
  last_name: Storck
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
citation:
  ama: Bruland P, Doods J, Storck M, Dugas M. What Information Does Your EHR Contain?
    Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification
    and Data Access Within Distributed Clinical Research Networks. <i>Studies in health
    technology and informatics</i>. 2017;245:313-317.
  apa: Bruland, P., Doods, J., Storck, M., &#38; Dugas, M. (2017). What Information
    Does Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW)
    to Support Identification and Data Access Within Distributed Clinical Research
    Networks. <i>Studies in Health Technology and Informatics</i>, <i>245</i>, 313–317.
  bjps: <b>Bruland P <i>et al.</i></b> (2017) What Information Does Your EHR Contain?
    Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification
    and Data Access Within Distributed Clinical Research Networks. <i>Studies in health
    technology and informatics</i> <b>245</b>, 313–317.
  chicago: 'Bruland, Philipp, J Doods, M Storck, and M Dugas. “What Information Does
    Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW)
    to Support Identification and Data Access Within Distributed Clinical Research
    Networks.” <i>Studies in Health Technology and Informatics</i> 245 (2017): 313–17.'
  chicago-de: 'Bruland, Philipp, J Doods, M Storck und M Dugas. 2017. What Information
    Does Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW)
    to Support Identification and Data Access Within Distributed Clinical Research
    Networks. <i>Studies in health technology and informatics</i> 245: 313–317.'
  din1505-2-1: '<span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span
    style="font-variant:small-caps;">Doods, J</span> ; <span style="font-variant:small-caps;">Storck,
    M</span> ; <span style="font-variant:small-caps;">Dugas, M</span>: What Information
    Does Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW)
    to Support Identification and Data Access Within Distributed Clinical Research
    Networks. In: <i>Studies in health technology and informatics</i> Bd. 245 (2017),
    S. 313–317'
  havard: P. Bruland, J. Doods, M. Storck, M. Dugas, What Information Does Your EHR
    Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support
    Identification and Data Access Within Distributed Clinical Research Networks.,
    Studies in Health Technology and Informatics. 245 (2017) 313–317.
  ieee: P. Bruland, J. Doods, M. Storck, and M. Dugas, “What Information Does Your
    EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support
    Identification and Data Access Within Distributed Clinical Research Networks.,”
    <i>Studies in health technology and informatics</i>, vol. 245, pp. 313–317, 2017.
  mla: Bruland, Philipp, et al. “What Information Does Your EHR Contain? Automatic
    Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification and
    Data Access Within Distributed Clinical Research Networks.” <i>Studies in Health
    Technology and Informatics</i>, vol. 245, 2017, pp. 313–17.
  short: P. Bruland, J. Doods, M. Storck, M. Dugas, Studies in Health Technology and
    Informatics 245 (2017) 313–317.
  ufg: '<b>Bruland, Philipp u. a.</b>: What Information Does Your EHR Contain? Automatic
    Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification and
    Data Access Within Distributed Clinical Research Networks., in: <i>Studies in
    health technology and informatics</i> 245 (2017),  S. 313–317.'
  van: Bruland P, Doods J, Storck M, Dugas M. What Information Does Your EHR Contain?
    Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification
    and Data Access Within Distributed Clinical Research Networks. Studies in health
    technology and informatics. 2017;245:313–7.
date_created: 2024-06-24T07:36:24Z
date_updated: 2024-07-18T13:42:49Z
department:
- _id: DEP5024
extern: '1'
external_id:
  pmid:
  - '29295106'
intvolume: '       245'
keyword:
- Information Systems
- Metadata
- Semantics
language:
- iso: eng
page: 313-317
pmid: '1'
publication: Studies in health technology and informatics
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publication_status: published
status: public
title: What Information Does Your EHR Contain? Automatic Generation of a Clinical
  Metadata Warehouse (CMDW) to Support Identification and Data Access Within Distributed
  Clinical Research Networks.
type: journal_article
user_id: '83781'
volume: 245
year: '2017'
...
---
_id: '11590'
abstract:
- lang: eng
  text: Reading centers provide centralized high-quality diagnostics in ophthalmic
    clinical trials. Since ophthalmic images are captured in electronic format at
    peripheral clinics, an integrated workflow for image transfer and creation of
    structured reports is needed, including quality assurance. The image portal and
    the study database are separate components. We assessed whether this integration
    is feasible with trial-related IT standards and built a prototype system as a
    proof-of-concept. CDISC ODM and OAuth authentication were used to integrate the
    image portal with x4T-EDC, facilitating automatic data transfer and single sign-on.
author:
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: Ulrike
  full_name: Kathöfer, Ulrike
  last_name: Kathöfer
- first_name: Maximilian
  full_name: Treder, Maximilian
  last_name: Treder
- first_name: Nicole
  full_name: Eter, Nicole
  last_name: Eter
- first_name: Martin
  full_name: Dugas, Martin
  last_name: Dugas
citation:
  ama: Bruland P, Kathöfer U, Treder M, Eter N, Dugas M. Integrating x4T-EDC into
    an Image-Portal to Establish an Ophthalmic Reading Center. <i>Studies in health
    technology and informatics</i>. 2017;245:1254.
  apa: Bruland, P., Kathöfer, U., Treder, M., Eter, N., &#38; Dugas, M. (2017). Integrating
    x4T-EDC into an Image-Portal to Establish an Ophthalmic Reading Center. <i>Studies
    in Health Technology and Informatics</i>, <i>245</i>, 1254.
  bjps: <b>Bruland P <i>et al.</i></b> (2017) Integrating X4T-EDC into an Image-Portal
    to Establish an Ophthalmic Reading Center. <i>Studies in health technology and
    informatics</i> <b>245</b>, 1254.
  chicago: 'Bruland, Philipp, Ulrike Kathöfer, Maximilian Treder, Nicole Eter, and
    Martin Dugas. “Integrating X4T-EDC into an Image-Portal to Establish an Ophthalmic
    Reading Center.” <i>Studies in Health Technology and Informatics</i> 245 (2017):
    1254.'
  chicago-de: 'Bruland, Philipp, Ulrike Kathöfer, Maximilian Treder, Nicole Eter und
    Martin Dugas. 2017. Integrating x4T-EDC into an Image-Portal to Establish an Ophthalmic
    Reading Center. <i>Studies in health technology and informatics</i> 245: 1254.'
  din1505-2-1: '<span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span
    style="font-variant:small-caps;">Kathöfer, Ulrike</span> ; <span style="font-variant:small-caps;">Treder,
    Maximilian</span> ; <span style="font-variant:small-caps;">Eter, Nicole</span>
    ; <span style="font-variant:small-caps;">Dugas, Martin</span>: Integrating x4T-EDC
    into an Image-Portal to Establish an Ophthalmic Reading Center. In: <i>Studies
    in health technology and informatics</i> Bd. 245, IOS Press (2017), S. 1254'
  havard: P. Bruland, U. Kathöfer, M. Treder, N. Eter, M. Dugas, Integrating x4T-EDC
    into an Image-Portal to Establish an Ophthalmic Reading Center., Studies in Health
    Technology and Informatics. 245 (2017) 1254.
  ieee: P. Bruland, U. Kathöfer, M. Treder, N. Eter, and M. Dugas, “Integrating x4T-EDC
    into an Image-Portal to Establish an Ophthalmic Reading Center.,” <i>Studies in
    health technology and informatics</i>, vol. 245, p. 1254, 2017.
  mla: Bruland, Philipp, et al. “Integrating X4T-EDC into an Image-Portal to Establish
    an Ophthalmic Reading Center.” <i>Studies in Health Technology and Informatics</i>,
    vol. 245, 2017, p. 1254.
  short: P. Bruland, U. Kathöfer, M. Treder, N. Eter, M. Dugas, Studies in Health
    Technology and Informatics 245 (2017) 1254.
  ufg: '<b>Bruland, Philipp u. a.</b>: Integrating x4T-EDC into an Image-Portal to
    Establish an Ophthalmic Reading Center., in: <i>Studies in health technology and
    informatics</i> 245 (2017),  S. 1254.'
  van: Bruland P, Kathöfer U, Treder M, Eter N, Dugas M. Integrating x4T-EDC into
    an Image-Portal to Establish an Ophthalmic Reading Center. Studies in health technology
    and informatics. 2017;245:1254.
date_created: 2024-06-24T07:39:08Z
date_updated: 2024-08-15T12:56:05Z
department:
- _id: DEP5024
external_id:
  pmid:
  - '29295339'
intvolume: '       245'
keyword:
- Electronic Data Capture
- Reading Center
- System Integration
language:
- iso: eng
page: '1254'
pmid: '1'
publication: Studies in health technology and informatics
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publication_status: published
publisher: IOS Press
status: public
title: Integrating x4T-EDC into an Image-Portal to Establish an Ophthalmic Reading
  Center.
type: journal_article
user_id: '83781'
volume: 245
year: '2017'
...
---
_id: '11575'
abstract:
- lang: eng
  text: In the treatment of chronic pruritus-related, scratch-induced skin lesions
    the categorization, counting and temporal comparison are common methodologies.
    The observation requires a good memory and expertise in this field to gain comparable
    findings for this time-consuming process. Digital image processing aims at supporting
    such manual detections. The objective is to develop a software tool for automatic
    image detection and comparison. The new photographic setting implies the usage
    of markers to derive the brightness and size of lesions. MATLAB has been used
    for the software development. The newly defined setting allows taking standardized
    images of pruritus-associated cutaneous lesions for detection and comparison.
    The tool named PIACS (Prurigo Image Analyzing and Comparing System) allows automatically
    detecting, categorizing and comparing lesions based on digital images.
author:
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: Waldemar
  full_name: Hänse, Waldemar
  last_name: Hänse
- first_name: Fiona
  full_name: Schedel, Fiona
  last_name: Schedel
- first_name: Sonja
  full_name: Ständer, Sonja
  last_name: Ständer
- first_name: Fleur
  full_name: Fritz, Fleur
  last_name: Fritz
citation:
  ama: 'Bruland P, Hänse W, Schedel F, Ständer S, Fritz F. PIACS: A System for the
    Automatic Detection, Categorization and Comparison of Scratch-Related Skin Lesions
    in Dermatology. <i>Studies in health technology and informatics</i>. 2015;216:1042.'
  apa: 'Bruland, P., Hänse, W., Schedel, F., Ständer, S., &#38; Fritz, F. (2015).
    PIACS: A System for the Automatic Detection, Categorization and Comparison of
    Scratch-Related Skin Lesions in Dermatology. <i>Studies in Health Technology and
    Informatics</i>, <i>216</i>, 1042.'
  bjps: '<b>Bruland P <i>et al.</i></b> (2015) PIACS: A System for the Automatic Detection,
    Categorization and Comparison of Scratch-Related Skin Lesions in Dermatology.
    <i>Studies in health technology and informatics</i> <b>216</b>, 1042.'
  chicago: 'Bruland, Philipp, Waldemar Hänse, Fiona Schedel, Sonja Ständer, and Fleur
    Fritz. “PIACS: A System for the Automatic Detection, Categorization and Comparison
    of Scratch-Related Skin Lesions in Dermatology.” <i>Studies in Health Technology
    and Informatics</i> 216 (2015): 1042.'
  chicago-de: 'Bruland, Philipp, Waldemar Hänse, Fiona Schedel, Sonja Ständer und
    Fleur Fritz. 2015. PIACS: A System for the Automatic Detection, Categorization
    and Comparison of Scratch-Related Skin Lesions in Dermatology. <i>Studies in health
    technology and informatics</i> 216: 1042.'
  din1505-2-1: '<span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span
    style="font-variant:small-caps;">Hänse, Waldemar</span> ; <span style="font-variant:small-caps;">Schedel,
    Fiona</span> ; <span style="font-variant:small-caps;">Ständer, Sonja</span> ;
    <span style="font-variant:small-caps;">Fritz, Fleur</span>: PIACS: A System for
    the Automatic Detection, Categorization and Comparison of Scratch-Related Skin
    Lesions in Dermatology. In: <i>Studies in health technology and informatics</i>
    Bd. 216, IOS Press (2015), S. 1042'
  havard: 'P. Bruland, W. Hänse, F. Schedel, S. Ständer, F. Fritz, PIACS: A System
    for the Automatic Detection, Categorization and Comparison of Scratch-Related
    Skin Lesions in Dermatology., Studies in Health Technology and Informatics. 216
    (2015) 1042.'
  ieee: 'P. Bruland, W. Hänse, F. Schedel, S. Ständer, and F. Fritz, “PIACS: A System
    for the Automatic Detection, Categorization and Comparison of Scratch-Related
    Skin Lesions in Dermatology.,” <i>Studies in health technology and informatics</i>,
    vol. 216, p. 1042, 2015.'
  mla: 'Bruland, Philipp, et al. “PIACS: A System for the Automatic Detection, Categorization
    and Comparison of Scratch-Related Skin Lesions in Dermatology.” <i>Studies in
    Health Technology and Informatics</i>, vol. 216, 2015, p. 1042.'
  short: P. Bruland, W. Hänse, F. Schedel, S. Ständer, F. Fritz, Studies in Health
    Technology and Informatics 216 (2015) 1042.
  ufg: '<b>Bruland, Philipp u. a.</b>: PIACS: A System for the Automatic Detection,
    Categorization and Comparison of Scratch-Related Skin Lesions in Dermatology.,
    in: <i>Studies in health technology and informatics</i> 216 (2015),  S. 1042.'
  van: 'Bruland P, Hänse W, Schedel F, Ständer S, Fritz F. PIACS: A System for the
    Automatic Detection, Categorization and Comparison of Scratch-Related Skin Lesions
    in Dermatology. Studies in health technology and informatics. 2015;216:1042.'
date_created: 2024-06-24T07:36:14Z
date_updated: 2024-07-18T13:45:10Z
department:
- _id: DEP5024
external_id:
  pmid:
  - '26262341'
intvolume: '       216'
language:
- iso: eng
page: '1042'
pmid: '1'
publication: Studies in health technology and informatics
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publication_status: published
publisher: IOS Press
status: public
title: 'PIACS: A System for the Automatic Detection, Categorization and Comparison
  of Scratch-Related Skin Lesions in Dermatology.'
type: journal_article
user_id: '83781'
volume: 216
year: '2015'
...
---
_id: '11573'
abstract:
- lang: eng
  text: 'Planning case report forms for data capture in clinical trials is a labor-insensitive
    and not formalized process. These CRFs are often neither standardized nor using
    defined data elements. Metadata registries as the NCI caDSR provide the capability
    to create forms based on common data elements. However, an exchange of these forms
    into clinical trial management systems through a standardized format like CDISC
    ODM is currently not offered. Thus, our objectives were to develop a mapping model
    between NCI forms and ODM. We analyzed 3012 NCI forms and included common data
    elements regarding their frequency and uniqueness. In this paper, we have created
    a mapping model between both formats and identified limitations in the conversion
    process: Semantic codes requested from the caDSR registry did not allow a proper
    mapping to ODM items and information like the number of module repetitions got
    lost. Summarized, it can be stated that our mapping model is feasible. However,
    mapping of semantic concepts in ODM needs to be specified more precisely.'
author:
- first_name: Philipp
  full_name: Bruland, Philipp
  id: '75847'
  last_name: Bruland
  orcid: 0000-0001-6939-7630
- first_name: Bernhard
  full_name: Breil, Bernhard
  last_name: Breil
- first_name: Fleur
  full_name: Fritz, Fleur
  last_name: Fritz
- first_name: Martin
  full_name: Dugas, Martin
  last_name: Dugas
citation:
  ama: 'Bruland P, Breil B, Fritz F, Dugas M. Interoperability in clinical research:
    from metadata registries to semantically annotated CDISC ODM. <i>Studies in health
    technology and informatics</i>. 2012;180:564-568.'
  apa: 'Bruland, P., Breil, B., Fritz, F., &#38; Dugas, M. (2012). Interoperability
    in clinical research: from metadata registries to semantically annotated CDISC
    ODM. <i>Studies in Health Technology and Informatics</i>, <i>180</i>, 564–568.'
  bjps: '<b>Bruland P <i>et al.</i></b> (2012) Interoperability in Clinical Research:
    From Metadata Registries to Semantically Annotated CDISC ODM. <i>Studies in health
    technology and informatics</i> <b>180</b>, 564–568.'
  chicago: 'Bruland, Philipp, Bernhard Breil, Fleur Fritz, and Martin Dugas. “Interoperability
    in Clinical Research: From Metadata Registries to Semantically Annotated CDISC
    ODM.” <i>Studies in Health Technology and Informatics</i> 180 (2012): 564–68.'
  chicago-de: 'Bruland, Philipp, Bernhard Breil, Fleur Fritz und Martin Dugas. 2012.
    Interoperability in clinical research: from metadata registries to semantically
    annotated CDISC ODM. <i>Studies in health technology and informatics</i> 180:
    564–568.'
  din1505-2-1: '<span style="font-variant:small-caps;">Bruland, Philipp</span> ; <span
    style="font-variant:small-caps;">Breil, Bernhard</span> ; <span style="font-variant:small-caps;">Fritz,
    Fleur</span> ; <span style="font-variant:small-caps;">Dugas, Martin</span>: Interoperability
    in clinical research: from metadata registries to semantically annotated CDISC
    ODM. In: <i>Studies in health technology and informatics</i> Bd. 180, IOS Press
    (2012), S. 564–568'
  havard: 'P. Bruland, B. Breil, F. Fritz, M. Dugas, Interoperability in clinical
    research: from metadata registries to semantically annotated CDISC ODM., Studies
    in Health Technology and Informatics. 180 (2012) 564–568.'
  ieee: 'P. Bruland, B. Breil, F. Fritz, and M. Dugas, “Interoperability in clinical
    research: from metadata registries to semantically annotated CDISC ODM.,” <i>Studies
    in health technology and informatics</i>, vol. 180, pp. 564–568, 2012.'
  mla: 'Bruland, Philipp, et al. “Interoperability in Clinical Research: From Metadata
    Registries to Semantically Annotated CDISC ODM.” <i>Studies in Health Technology
    and Informatics</i>, vol. 180, 2012, pp. 564–68.'
  short: P. Bruland, B. Breil, F. Fritz, M. Dugas, Studies in Health Technology and
    Informatics 180 (2012) 564–568.
  ufg: '<b>Bruland, Philipp u. a.</b>: Interoperability in clinical research: from
    metadata registries to semantically annotated CDISC ODM., in: <i>Studies in health
    technology and informatics</i> 180 (2012),  S. 564–568.'
  van: 'Bruland P, Breil B, Fritz F, Dugas M. Interoperability in clinical research:
    from metadata registries to semantically annotated CDISC ODM. Studies in health
    technology and informatics. 2012;180:564–8.'
date_created: 2024-06-24T07:34:50Z
date_updated: 2024-08-21T06:13:06Z
department:
- _id: DEP5024
external_id:
  pmid:
  - '22874254'
intvolume: '       180'
language:
- iso: eng
page: 564-568
pmid: '1'
publication: Studies in health technology and informatics
publication_identifier:
  eissn:
  - 1879-8365
  issn:
  - 0926-9630
publication_status: published
publisher: IOS Press
status: public
title: 'Interoperability in clinical research: from metadata registries to semantically
  annotated CDISC ODM.'
type: journal_article
user_id: '83781'
volume: 180
year: '2012'
...
---
_id: '11596'
author:
- first_name: B
  full_name: Breil, B
  last_name: Breil
- first_name: A
  full_name: Watermann, A
  last_name: Watermann
- first_name: P
  full_name: Haas, P
  last_name: Haas
- first_name: P
  full_name: Dziuballe, P
  last_name: Dziuballe
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
citation:
  ama: Breil B, Watermann A, Haas P, Dziuballe P, Dugas M. Semantic enrichment of
    medical forms - semi-automated coding of ODM-elements via web services. <i>Stud
    Health Technol Inform</i>. 2012;180:1102-1104.
  apa: Breil, B., Watermann, A., Haas, P., Dziuballe, P., &#38; Dugas, M. (2012).
    Semantic enrichment of medical forms - semi-automated coding of ODM-elements via
    web services. <i>Stud Health Technol Inform</i>, <i>180</i>, 1102–1104.
  bjps: <b>Breil B <i>et al.</i></b> (2012) Semantic Enrichment of Medical Forms -
    Semi-Automated Coding of ODM-Elements via Web Services. <i>Stud Health Technol
    Inform</i> <b>180</b>, 1102–1104.
  chicago: 'Breil, B, A Watermann, P Haas, P Dziuballe, and M Dugas. “Semantic Enrichment
    of Medical Forms - Semi-Automated Coding of ODM-Elements via Web Services.” <i>Stud
    Health Technol Inform</i> 180 (2012): 1102–4.'
  chicago-de: 'Breil, B, A Watermann, P Haas, P Dziuballe und M Dugas. 2012. Semantic
    enrichment of medical forms - semi-automated coding of ODM-elements via web services.
    <i>Stud Health Technol Inform</i> 180: 1102–1104.'
  din1505-2-1: '<span style="font-variant:small-caps;">Breil, B</span> ; <span style="font-variant:small-caps;">Watermann,
    A</span> ; <span style="font-variant:small-caps;">Haas, P</span> ; <span style="font-variant:small-caps;">Dziuballe,
    P</span> ; <span style="font-variant:small-caps;">Dugas, M</span>: Semantic enrichment
    of medical forms - semi-automated coding of ODM-elements via web services. In:
    <i>Stud Health Technol Inform</i> Bd. 180 (2012), S. 1102–1104'
  havard: B. Breil, A. Watermann, P. Haas, P. Dziuballe, M. Dugas, Semantic enrichment
    of medical forms - semi-automated coding of ODM-elements via web services., Stud
    Health Technol Inform. 180 (2012) 1102–1104.
  ieee: B. Breil, A. Watermann, P. Haas, P. Dziuballe, and M. Dugas, “Semantic enrichment
    of medical forms - semi-automated coding of ODM-elements via web services.,” <i>Stud
    Health Technol Inform</i>, vol. 180, pp. 1102–1104, 2012.
  mla: Breil, B., et al. “Semantic Enrichment of Medical Forms - Semi-Automated Coding
    of ODM-Elements via Web Services.” <i>Stud Health Technol Inform</i>, vol. 180,
    2012, pp. 1102–04.
  short: B. Breil, A. Watermann, P. Haas, P. Dziuballe, M. Dugas, Stud Health Technol
    Inform 180 (2012) 1102–1104.
  ufg: '<b>Breil, B. u. a.</b>: Semantic enrichment of medical forms - semi-automated
    coding of ODM-elements via web services., in: <i>Stud Health Technol Inform</i>
    180 (2012),  S. 1102–1104.'
  van: Breil B, Watermann A, Haas P, Dziuballe P, Dugas M. Semantic enrichment of
    medical forms - semi-automated coding of ODM-elements via web services. Stud Health
    Technol Inform. 2012;180:1102–4.
date_created: 2024-06-24T09:13:15Z
date_updated: 2024-06-24T09:14:00Z
external_id:
  pmid:
  - '22874367'
intvolume: '       180'
page: 1102-1104
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  issn:
  - 0926-9630
  - 1879-8365
status: public
title: Semantic enrichment of medical forms - semi-automated coding of ODM-elements
  via web services.
type: journal_article
user_id: '75847'
volume: 180
year: '2012'
...
---
_id: '11597'
author:
- first_name: P
  full_name: Dziuballe, P
  last_name: Dziuballe
- first_name: C
  full_name: Forster, C
  last_name: Forster
- first_name: B
  full_name: Breil, B
  last_name: Breil
- first_name: V
  full_name: Thiemann, V
  last_name: Thiemann
- first_name: F
  full_name: Fritz, F
  last_name: Fritz
- first_name: J
  full_name: Lechtenbörger, J
  last_name: Lechtenbörger
- first_name: G
  full_name: Vossen, G
  last_name: Vossen
- first_name: M
  full_name: Dugas, M
  last_name: Dugas
citation:
  ama: Dziuballe P, Forster C, Breil B, et al. The single source architecture x4T
    to connect medical documentation and clinical research. <i>Stud Health Technol
    Inform</i>. 2011;169:902-906.
  apa: Dziuballe, P., Forster, C., Breil, B., Thiemann, V., Fritz, F., Lechtenbörger,
    J., Vossen, G., &#38; Dugas, M. (2011). The single source architecture x4T to
    connect medical documentation and clinical research. <i>Stud Health Technol Inform</i>,
    <i>169</i>, 902–906.
  bjps: <b>Dziuballe P <i>et al.</i></b> (2011) The Single Source Architecture X4T
    to Connect Medical Documentation and Clinical Research. <i>Stud Health Technol
    Inform</i> <b>169</b>, 902–906.
  chicago: 'Dziuballe, P, C Forster, B Breil, V Thiemann, F Fritz, J Lechtenbörger,
    G Vossen, and M Dugas. “The Single Source Architecture X4T to Connect Medical
    Documentation and Clinical Research.” <i>Stud Health Technol Inform</i> 169 (2011):
    902–6.'
  chicago-de: 'Dziuballe, P, C Forster, B Breil, V Thiemann, F Fritz, J Lechtenbörger,
    G Vossen und M Dugas. 2011. The single source architecture x4T to connect medical
    documentation and clinical research. <i>Stud Health Technol Inform</i> 169: 902–906.'
  din1505-2-1: '<span style="font-variant:small-caps;">Dziuballe, P</span> ; <span
    style="font-variant:small-caps;">Forster, C</span> ; <span style="font-variant:small-caps;">Breil,
    B</span> ; <span style="font-variant:small-caps;">Thiemann, V</span> ; <span style="font-variant:small-caps;">Fritz,
    F</span> ; <span style="font-variant:small-caps;">Lechtenbörger, J</span> ; <span
    style="font-variant:small-caps;">Vossen, G</span> ; <span style="font-variant:small-caps;">Dugas,
    M</span>: The single source architecture x4T to connect medical documentation
    and clinical research. In: <i>Stud Health Technol Inform</i> Bd. 169 (2011), S. 902–906'
  havard: P. Dziuballe, C. Forster, B. Breil, V. Thiemann, F. Fritz, J. Lechtenbörger,
    G. Vossen, M. Dugas, The single source architecture x4T to connect medical documentation
    and clinical research., Stud Health Technol Inform. 169 (2011) 902–906.
  ieee: P. Dziuballe <i>et al.</i>, “The single source architecture x4T to connect
    medical documentation and clinical research.,” <i>Stud Health Technol Inform</i>,
    vol. 169, pp. 902–906, 2011.
  mla: Dziuballe, P., et al. “The Single Source Architecture X4T to Connect Medical
    Documentation and Clinical Research.” <i>Stud Health Technol Inform</i>, vol.
    169, 2011, pp. 902–06.
  short: P. Dziuballe, C. Forster, B. Breil, V. Thiemann, F. Fritz, J. Lechtenbörger,
    G. Vossen, M. Dugas, Stud Health Technol Inform 169 (2011) 902–906.
  ufg: '<b>Dziuballe, P. u. a.</b>: The single source architecture x4T to connect
    medical documentation and clinical research., in: <i>Stud Health Technol Inform</i>
    169 (2011),  S. 902–906.'
  van: Dziuballe P, Forster C, Breil B, Thiemann V, Fritz F, Lechtenbörger J, et al.
    The single source architecture x4T to connect medical documentation and clinical
    research. Stud Health Technol Inform. 2011;169:902–6.
date_created: 2024-06-24T09:13:33Z
date_updated: 2024-06-24T09:13:53Z
external_id:
  pmid:
  - '21893877'
intvolume: '       169'
language:
- iso: eng
page: 902-906
pmid: '1'
publication: Stud Health Technol Inform
publication_identifier:
  issn:
  - 0926-9630
  - 1879-8365
status: public
title: The single source architecture x4T to connect medical documentation and clinical
  research.
type: journal_article
user_id: '75847'
volume: 169
year: '2011'
...
